Insertion type | Comparison | GEO datasets | All differentially expressed genes | Upregulated genes | Downregulated genes | |||
---|---|---|---|---|---|---|---|---|
P value | Genes (n) | P value | Genes (n) | P value | Genes (n) | |||
All insertion | ASD vs. control | GSE15402 | 0.799 | 215 | 0.926 | 100 | 0.799 | 116 |
GSE18123 | < 0.00005 | 1492 | 1.000 | 255 | < 0.00005 | 1245 | ||
GSE25507 | 0.012 | 869 | 0.256 | 522 | < 0.00005 | 355 | ||
GSE42133 | < 0.00005 | 1001 | 0.015 | 387 | < 0.00005 | 624 | ||
GSE6575 | < 0.00005 | 388 | 0.955 | 123 | < 0.00005 | 266 | ||
Intronic | ASD vs. control | GSE15402 | 0.784 | 212 | 0.926 | 99 | 0.784 | 114 |
GSE18123 | < 0.00005 | 1476 | 0.970 | 252 | < 0.00005 | 1231 | ||
GSE25507 | 0.007 | 860 | 0.322 | 516 | < 0.00005 | 352 | ||
GSE42133 | < 0.00005 | 985 | 0.012 | 382 | < 0.00005 | 613 | ||
GSE6575 | < 0.00005 | 382 | 0.882 | 119 | < 0.00005 | 264 | ||
Exonized | ASD vs. control | GSE15402 | 1.000 | 15 | 0.933 | 6 | 0.933 | 9 |
GSE18123 | 0.009 | 102 | 0.926 | 14 | 0.003 | 88 | ||
GSE25507 | 0.825 | 45 | 0.008 | 17 | 0.012 | 28 | ||
GSE42133 | 0.008 | 75 | 0.306 | 27 | 0.015 | 49 | ||
GSE6575 | 0.006 | 33 | 1.000 | 7 | < 0.00005 | 26 | ||
Exonic | ASD vs. control | GSE15402 | 0.450 | 19 | 0.904 | 10 | 0.426 | 9 |
GSE18123 | 0.001 | 177 | 0.306 | 21 | < 0.00005 | 158 | ||
GSE25507 | 0.426 | 78 | 0.136 | 46 | 0.662 | 33 | ||
GSE42133 | < 0.00005 | 148 | 0.799 | 43 | < 0.00005 | 106 | ||
GSE6575 | 0.034 | 48 | 0.715 | 16 | 0.013 | 33 | ||
Promoter | ASD vs. control | GSE15402 | 0.933 | 6 | 0.436 | 1 | 0.799 | 5 |
GSE18123 | 0.240 | 37 | 0.898 | 8 | 0.268 | 29 | ||
GSE25507 | 0.135 | 22 | 0.033 | 11 | 0.937 | 11 | ||
GSE42133 | 0.831 | 35 | 0.447 | 19 | 0.255 | 16 | ||
GSE6575 | 0.466 | 16 | 0.716 | 3 | 0.123 | 13 |