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Table 2 List of primers used for qRT-PCR

From: Decitabine alters the expression of Mecp2 isoforms via dynamic DNA methylation at the Mecp2 regulatory elements in neural stem cells

Gene

Direction

Sequence

Reference

Mecp2 (total)

Forward

5′-GGTAAAACCCGTCCGGAAAATG-3′

[4]

Reverse

5′-TTCAGTGGCTTGTCTCTGAG-3′

Mecp2e1

Forward

5′-AGGAGAGACTGGAGGAAAAGT-3′

[5]

Reverse

5′-CTTAAACTTCAGTGGCTTGTCTCTG-3′

Mecp2e2

Forward

5′-CTCACCAGTTCCTGCTTTGATGT-3′

Reverse

5′-CTTAAACTTCAGTGGCTTGTCTCTG-3′

Tubulin III (Tub III )

Forward

5′-TCAGCGATGAGCACGGCATA-3′

[37]

Reverse

5′-CACTCTTTCCGCACGACATC-3′

Gfap

Forward

5′-GCTCACAATACAAGTTGTCC-3′

Reverse

5′-ACCTAATTACACAGAGCCAGG-3′

Gapdh

Forward

5′-AACGACCCCTTCATTGAC-3′

[43]

Reverse

5′-TCCACGACATACTCAGCAC-3′

NeuN

Forward

5′-GGCAATGGTGGGACTCAAAA-3′

[44]

Reverse

5′-GGGACCCGCTCCTTCAAC-3′

S100b

Forward

5′-GCTGACCACCATGCCCCTGTAG-3′

[45]

Reverse

5′-CTGGCCATTCCCTCCTCTGTC-3′

Mbp

Forward

5′-GGCACGCTTTCCAAAATCT-3′

[46]

Reverse

5′-CCATGGGAGATCCAGAGC-3′

Cnpase

Forward

5′-CATCCTCAGGAGCAAAGGAG-3′

[47]

Reverse

5′-TGAATAGCGTCTTGCACTCG-3′

Dnmt1

Forward

5′-AGGGAAAAGGGAAGGGCAAG-3′

[48]

Reverse

5′-AGAAAACACATCCAGGGTCCG-3′

Dnmt3a

Forward

5′-CAGCGTCACACAGAAGCATATCC-3′

Reverse

5′-GGTCCTCACTTTGCTGAACTTGG-3′

Dnmt3b

Forward

5′-CCTGCTGAATTACTCACGCCCC-3′

Reverse

5′-GTCTGTGTAGTGCACAGGAAAA-3′

Xist

Forward

5′-TTGTGGCTTGCTAATAAT-3′

[39]

Reverse

5′-AAACCCCATCCTTTATG-3′